Module membership and gene significance
Web10 mei 2024 · Genes with a significance over 0.2 and a module membership over 0.8 were used as hub genes. Subsequently, we screened these hub genes in the published … Web Module membership and corresponding gene significance and protein-protein interaction (PPI) network construction of two key modules. (A) Module membership …
Module membership and gene significance
Did you know?
Web12 aug. 2024 · Just like what have been said, I analyzed the genes in key module by DAVID, with P < 0.05 considered statistically significant. PPI network construction and module selection. According to the standard of gene significance (GS) > 0.3 and module membership (MM) > 0.8, I selected 83 hub genes from the key module. WebVisualization of gene significance (GS) vs. module membership (MM) and gene expression levels of significant modules. Scatterplot represents the GS and MM of …
WebWe found a module whose eigengene is highly associated with disease status and whose GO results indicate the module genes are associated with inflammatory processes that … Web(E) Scatter plot shows the gene module membership and gene significance of the blue module. (F) Common genes with statistical significance in different methods, including survival, one-way ANOVA ...
Web23 mrt. 2024 · A total of 432 genes were included in the turquoise module . Moreover, we illustrated in turquoise the module membership and gene significance for AF with stroke (correlation coefficient = 0.32, P < 0.001) . In addition, genes in the turquoise module were overlapped with DEGs in GSE66724. Web27 feb. 2024 · Fourth, modules were detected using hierarchical clustering and dynamic tree cutting functions. Finally, gene significance (GS) and module membership (MM) correlations were calculated, and the corresponding module gene information was extracted for further analysis.
WebWGCNA gene significance and module membership. I am completing WGCNA on RNAseq data for 3 groups of patients disease responders, non-responders and controls. I am …
Web10 mei 2024 · Genes with a significance over 0.2 and a module membership over 0.8 were used as hub genes. Subsequently, we screened these hub genes in the published … i\\u0027m thrilled to shareWeb27 aug. 2024 · Mechanically, the potential regulators of blue module were investigated. These findings highlight an important role of the blue module and its affiliated genes in … network acquisitionWebThis explain why the Module eigengene (1st Principal component) of the turquoise module poorly correlate with the trait 6 (Module-trait relationship table). Perhaps, I … i\u0027m through meaningWebDownload scientific diagram Correlations between gene module memberships and gene significance for the modules associated with clinical traits. from publication: Gene Co-expression Networks Are ... i\u0027m throwing shade like its sunnyWeb23 jul. 2024 · Module connectivity and is clinical trait relationship identified as the absolute value of the Pearson’s correlation (Module Membership) and gene and the trait (Gene Significance). We set the Module Membership >0.6 and the Gene-Significance >0.3 for candidate hub genes. Moreover, we selected genes in the hub module and applied the … i\\u0027m thunderstruck ownersWeb29 dec. 2008 · The WGCNA R software package is a comprehensive collection of R functions for performing various aspects of weighted correlation network analysis. The package includes functions for network construction, module detection, gene selection, calculations of topological properties, data simulation, visualization, and interfacing with … networkactiv autapf crackWebCorrelations between gene module memberships and gene significance for the modules associated with clinical traits. Source publication Gene Co-expression Networks Are … i\u0027m thru with love作曲者